tutorials
 
 

The Program for Genomic Applications Education Website

 
     

PGA Education Tutorials

 
Presentations from our traveling tutorials . . .
2006 at WUSTL

Program, PGA Traveling Tutorials
Washington University , St. Louis , May 15-16, 2006
Day 1: Genome Sequence Analysis

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Biology Overview:
Extreme Comparative Genomics
Eddy Rubin, BerkeleyPGA

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Genome Browsers and Comparative Sequence Analysis
Jan-Fang Cheng, BerkeleyPGA

 

Accessing & Interpreting Genomic Data Using Sequence Analysis
Patsy Babbitt, BayGenomics

 

Comparative Genomic Resources to Annotate the Human Genome
Dario Boffelli, BerkeleyPGA

 

SNP Resources: Databases, Data Extraction and Analysis
Mark Rieder, SeattleSNP

 

GenMAPP: A Software Tool for the Analysis of Genome-Scale Data in the Context of Biological Pathways and the Gene Ontology
Kristina Hanspers, BayGenomics

 

Concurrent Hands-on Sessions:
VISTA , GenMAPP, BLAST+IGTC, SNP resources

Program, PGA Traveling Tutorials
Washington University , St. Louis , May 15-16, 2006
Day 2: Quantitative Trait Genetics

 

Biology Overview: The genetics of complex disease
Anne Kwitek, PhysGen

 

Resources for Complex Trait Analysis
Carol Bult, JAX PGA

 

Gene Trapping and Mouse Mutagenesis
Steve Young, BayGenomics

 

Rat Consomic Panels and ENU Mutagenesis
Mindy Dwinell, PhysGen

 

Bioinformatics Toolbox for Finding Complex Disease Genes
John Stylianou, JAX PGA

 

Translating animal models to the clinic setting
Howard Jacob, PhysGen

 

Tools for Association Studies: Candidate Genes and Quantitative Phenotypes
Dana Crawford, SeattleSNP

 

Concurrent Hands-on Sessions:
JQTL, Mouse Resources, Rat Phenotyping, LD and Tag SNPs

2006 at UAB

 

 

 

 

Presentations from our PGA institutions      
BerkeleyPGA
Download
Web Resources
Demos

Comparative Genomic Resources to Annotate the Human Genome

Exploring Genomic Resources

'06 WUSTL tutorials - Berkeley PGA overview


BerkeleyPGA website

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JAX-PGA
Download
Web Resources
Demos

Our Program - status 2004

Mouse Models in Research - 2004

Gene Expression Microarrays - section A
Gene Expression Microarrays - section B
'06 WUSTL tutorial - Bioinformatics toolbox

 

PDF

PDF

PDF
PDF


.PPT

JAX-PGA website

Mouse Phenome Database narrated tutorials

 

SeattleSNPs
Download
Web Resources
Demos

SNP Discovery and Analysis

SNP Discovery Workshop

 

 

SeattleSNPs website

Resources from the 2005 PGA Symposium

Traveling Tutorials - April 25-26 '05

Traveling Tutorials - May 2, 2005

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PhysGen
Download
Web Resources
Demos

Building a Phenome Project:
A Physiological Genomics Approach
to NHLBI Disorders in the Rat

 

PDF

 

PhysGen website

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BayGenomics
Download
Web Resources
Demos

The BayGenomics website

 

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BayGenomics website .
PGA Research
Download
Web Resources
Demos

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. NHLBI's PGA website .
PGA Education
Download
Web Resources
Demos

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. This website's homepage .
TransPGA projects
Download
Web Resources
Demos

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. The inter-institutional TransPGA Project .